When I open this in the profile modeler I am able to Verify Tool Path, no problems (3/8" end mill and 1/8" ball nose)
If I place my geometry on the same sheet and cut the part out, then profile it with my tool I am unable to Verify Tool Path in the profile modeler. I get an error.
Same tool group in profile modeler.
If you could supply the following files in addition to the design files you provided, I will have a look into your issue:
.X_T (Shape Manager file used to design .tol file)
.tol (Tool File used in Part Editor)
toolset.bin (tooling information from Profile Modeler)
EXPORT file from Control Nesting (Tooling information and settings from Machine)